PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22420
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family WRKY
Protein Properties Length: 313aa    MW: 34252.4 Da    PI: 8.6689
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22420genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.44.4e-21161222259
               --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-.SSSTTEEEEEEES--SS- CS
      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkvers.aedpkvveitYegeHnhe 59 
               +Dg++WrKYG K++ ++ fprsYYrC ++   +Cp+kk v+++ ++dp v+ +t  ++H+++
  EMT22420 161 NDGFHWRKYGEKKILNAVFPRSYYRCGYSdehRCPAKKVVQQQnNNDPPVFMVTLMNDHTCS 222
               7**************************998889*******8761679*************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.0E-22149222IPR003657WRKY domain
SuperFamilySSF1182909.55E-21154222IPR003657WRKY domain
SMARTSM007745.8E-29160223IPR003657WRKY domain
PROSITE profilePS5081115.112161219IPR003657WRKY domain
PfamPF031063.1E-22161221IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    Send to blast
MAMRPKSEMS PPPSDQRTAV IEELRKGAQL AECLRQQLEL IPELGRRNAA LANASNISAA  60
LVSSVSMLQS DREQYSCSSD ARAASYAAGA SGAGGRGGSG ARSGAIARTR KARHRQGIHG  120
EELPLNTIVA YTYLWGSVLG RNRYWQIHVN TKVTLTETPE NDGFHWRKYG EKKILNAVFP  180
RSYYRCGYSD EHRCPAKKVV QQQNNNDPPV FMVTLMNDHT CSSLFPANDQ PPSSSNSATA  240
NSQVLDFTKA SLSSAVGVSR LKKEEDAGMS VTVPSYTYDE LASYSSLPLL SPKEWEMEME  300
IKSLFSHHSG GGT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233189.21e-107PREDICTED: WRKY transcription factor 55-like
TrEMBLM8BC020.0M8BC02_AEGTA; Putative WRKY transcription factor 41
STRINGMLOC_57051.11e-152(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.26e-17WRKY family protein